Názov:Mapping between Genomes
Vedúci:Mgr. Bronislava Brejová, PhD.
Kµúčové slová:alignment, whole-genome alignment, region mapping, rank, select, range minimum query problem
Abstrakt:In this thesis we focus on the problem of mapping regions between genomes. The goal is to desing and implement a practical tool for efficiently mapping genomic regions from one genome to another, based on genomic alignments computed by existing programs. We propose representation of the alignment data and file formats allowing efficient data access, and discuss theoretical problems related to mapping. We also describe similar existing tools and compare them with our tool.

Súbory bakalárskej práce: